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LABORATORY OF PHYTOPARASITOLOGY

Headed by Zinovyeva Svetlana Vasilyevna, Dr. Biol. Sci.


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MAIN PUBLICATIONS


Monographs and chapters in collective monographs
  1. Subbotin S.A., Sturhan D. & Moens M. Molecular phylogenies of plant and entomoparasitic nematodes: congruence and incongruence with morphological and biological data. In: Cook, R., and Hunt, D.J. (Eds). Nematology Monographs and Perspective. 2004. P. 601-614.
  2. Hooper D.J., Hallmann J. & Subbotin S.A. Methods for extraction, processing and detection of plant and soil nematodes. In: M. Luc, R.A. Sikora and J. Bridge (Eds). Plant Parasitic Nematodes in Subtropical and Tropical Agriculture. Second Edition, CABI, 2005. P. 53-86.
  3. Subbotin S.A. & Moens, M.. Molecular Taxonomy and Phylogeny. In Book: Plant Nematology edited by R. Perry and M. Moens. CABI, UK. 2006. p.
  4. Subbotin S.A. & Moens, Molecular Taxonomy and Phylogeny. In Book: Plant Nematology edited by R. Perry and M. Moens. CABI, UK. 2006. 480 p.
  5. Zinovieva S.V. "Plant pathogen nematodes" in "Comprehensive and molecular plant pathology" eds. by Y.Dyakov, V.Dzhavakhiya and T.Korpela. « Elsevier». 2006. 496 p.

List of articles in reviewed Russian (with English version) and foreign journals for the period of 2002-2007
  1. Amiri S., Subbotin S.A. & Moens M. 2002. Identification of the beet cyst nematode Heterodera schachtii by PCR. European Journal of Plant Pathology, Vol. 108, p. 497-506.
  2. Dorofeeva L.V., Evtushenko L.I., Krausova V.I., Karpov A.V., Subbotin S.A. & Tiedje J.M. 2002. Rathayibacter caricis sp. nov. and Rathayibacter festucae sp. nov., isolated from the phyllosphere of Carex sp. and the leaf gall induced by the nematode Anguina graminis on Festuca rubra L. International Journal of Systematic and Evolutionary Microbiology, Vol. 52, p. 1917-1923.
  3. Mozgovaya, I.N., B.A. Byzov, N.F. Ryabchenko, N.D. Romanenko, D.G. Zvyagintsev. Nematicidal effects of the entomopathogenic bacteria Bacillus thuringiensis in soil. Pedobiologia, 2002, vol. 46. 558-572.
  4. Subbotin S.A., Rumpenhorst H.J., Sturhan D. & Moens M. 2002. Description of the Australian cereal cyst nematode Heterodera australis sp. n. (Tylenchida: Heteroderidae). Russian Journal of Nematology 10: 139-148.
  5. Amiri S., Subbotin S.A. & Moens M. 2003. Comparative morphometries and RAPD studies of Heterodera schachtii and H. betae populations. Russian Journal of Nematology 11: 87-95.
  6. Castillo P., Vovlas N., Subbotin S. & Troccoli, A. 2003. A new root-knot nematode: Meloidogyne baetica n. sp. (Nematoda: Heteroderidae) parasitizing wild olive in Southern Spain. Phytopathology 93: 1093-1102.
  7. Kulinich O.A. Surveys for the pine wood nematode in Russia. Nematology Monograph, Perspectives, 2003. Vol. 1, p. 65-75.
  8. Nguyen N.C. Subbotin S.A, Madani M, et al/ Radopholus duriophylus sp.n/ (Nematoda: Pratylenchidae) from Western Highland of Vietnam.). Nematology 5 (4), p. 549-558.
  9. Phan K. L., Subbotin S.A & Moens M. ., Nguyen N.C. 2003. Heterorhabditis baujardi sp. n. (Rhabditida: Heterorhabditidae) from Vietnam with morphometric data for H. indica populations. Nematology 5: 367-382.
  10. Tanha Maafi Z., Subbotin S.A. & Moens M. 2003. Molecular identification of cyst-forming nematodes (Heteroderidae) from Iran and a phylogeny based on the ITS sequences of rDNA. Nematology Vol.5 (1). p. 99-111.
  11. Tanha Maafi Z., Sturhan D., Kheir A., Subbotin S.A. et al. Morphology of some c cyst-forming nematodes from Iran Russin j. Nematology, 2003. V.l 1 (2) 59-78.
  12. Subbotin S.A., Sturhan D, Rumpenhorst H.J & Moens M. 2003. Molecular and morphological characterisation of the Heterodera avenae complex species (Tylenchida: Heteroderidae). Nematology 5: 515-538.
  13. Zheng J., Subbotin S.A., He S., Gu J. & Moens, M. 2003. Molecular characterisation of some Asian isolates of Bursaphelenchus xylophilus and B. mucronatus using PCR-RFLPs and sequences of ribosomal DNA. Russian Journal of Nematology 11: 17-22.
  14. Madani M., Vovlas, N., Castillo P., Subbotin S.A. & Moens M. 2004. Molecular characterization of cyst nematode species (Heterodera spp.) from the Mediterranean basin using RFLPs and sequences of ITS-rDNA. Journal of Phytopathology 152: 229-234.
  15. Nadezhda I. Sumenkova and Tatjana M. Gennadieva. Addition in the catalogue of nematode types in the collection of Phytoparasitology Laboratory at the Institute of Parasitology of the Russian Academy of Sciences // Russian Journal of TNematology, 2004, 12 (2): pp. 169-171.
  16. Spiridonov, S,E., Reid, A.P., Podrucka, K., Subbotin, S.A. & Moens, M. 2004. Phylogenetic relationships within the genus Steinernema (Nematoda: Rabditida) as inferred from analyses of sequences of the ITS1-5.8S-ITS2 region of rDNA and morphological features. Nematology 6: 547-566.
  17. Subbotin S.A., Krall E.L., Riley I., Chizhov V.N., Staelens A., De Loose M. & Moens M. 2004. Evolution of the gall-forming plant parasitic nematodes (Tylenchida: Anguinidae) and their relationships with hosts as inferred from Internel Transcribed Spacer sequences of nuclear ribosomal DNA. Molecular Phylogenetics and Evolution, Vol. 30. p. 226-235.
  18. Subbotin, S.A. & Sturhan D. 2004. Heterodera circeae sp. n. and H. Scutellariae sp. n. from Germany, with notes on the Goettingiana group (Tylenchida: Heteroderidae). Nematology 6: 343-355.
  19. Swart A., Subbotin S.A., Tiedt L.R. & Riley I.T. 2004. Anguina woodii sp. n. from grass in South Africa. Nematology. Vol 6. p. 129-144.
  20. Tanha Maafi Z., Sturhan D., Kheiri A., Geraert E., Subbotin, S.A. & Moens M. 2004. Morphology of some cyst-forming nematodes from Iran. Russian Journal of Nematology, Vol. 12 : p. 59-78.
  21. Trinh P.Q., Nguyen C.N., Waeyenberge L., Subbotin S.A., Karssen G. & Moens. M. 2004. Radopholus arabocoffeae sp. n. (Nematoda: Pratylenchidae), a nematode pathogenic to Coffea arabica in Vietnam, and additional data on R. duriophilus. Nematology, Vol. 6. p. 681-693.
  22. Handoo Z.A., Carta L.K. Skantar A.M., Ye W., Robbins R.T. Subbotin S.A., Fraedrich S.W. & Cram M.M. 2005. Morphological and molecular characterization of Longidorus americanum n. sp. (Nematoda: Longidoridae), a needle nematode parasitizing pine in Georgia. Journal of Nematology, Vol. 37. p. 94-104.
  23. Jiang L.Q., Zheng J.W., Waeyenberge L., Subbotin S.A. & Moens M. 2005. Duplex PCR based identification of Bursaphelenchus xylophilus (Steiner & Buhrer, 1934) Nickle, 1970. Russian Journal of Nematology, Vol. 13, p. 115-121.
  24. Kovaleva E.S., Masler E.P., Subbotin S. A. & Chitwood D.J. 2005. Molecular characterization of aldolase from Heterodera glycines and Globodera rostochiensis. Journal of Nematology, vol. 37 .p. 292-296.
  25. Madani M., Subbotin S.A. & Moens. M. 2005. Quantitative detection of the potato cyst nematode, Globodera pallida, and the beet cyst nematode, Heterodera schachtii, using Real-Time PCR with SYBR green I dye. Molecular and Cellular Probes. Vol. 29. p. 81-86.
  26. Phan L.K., Subbotin S.A., Waeyenberge L. & Moens M. 2005. A new entomopathogenic nematode, Steinernema robustispiculum n. sp. (Rhabditida: Steinemematidae), from Chumomray National Park in Vietnam. Systematic Parasitology, Vol. 60, p. 23-32.
  27. Rubtsova T.V., Moens M. & Subbotin S.A. 2005. PCR amplification of a rRNA gene fragment from formalin-fixed and glycerine-embedded nematodes from permanent slides. Russian Journal of Nematology Vol. l3. p. 137-140.
  28. Ryss A., P. Vieira, M. Mota & O. Kulinich 2005. A synopsis of the genus Bursaphelenchus Fuchs, 1937 (Aphelenchida: Parasitaphelenchidae) with keys to species. Nematology, 2005, Vol. 7(3), p. 393-458.
  29. Sturhan D., Shutova T.S, Akimov V.N. & Subbotin S.A. 2005. Occurrence, hosts, morphology, and molecular characterisation of Pasteuria bacteria parasitic in nematodes of the family Plectidae. Journal of Invertebrate Pathology, Vol. 88, p. 17-26.
  30. Subbotin S.A., Madani M., Krall E., Sturhan D. & Moens M. 2005. Molecular diagnostics, taxonomy and phylogeny of the stem nematode Ditylenchus dipsaci species complex based on the sequences of the ITS-rDNA. Phytopathology. Vol. 95 p. 1308-1315.
  31. Subbotin S.A., Vovlas N., Crozzoli R., Sturhan D., Lamberti F., Moens M. & Baldwin J.G. 2005. Phylogeny of Criconematina Siddiqi, 1980 (Nematoda: Tylenchida) based on morphology and D2-D3 expansion segments of the 28S-rRNA gene sequences with application of a secondary structure model. Nematology. Vol. 7. p. 927-944.
  32. Yu H., Subbotin S.A., Rubtsova T.V., Lamberti F., Brown D.J.F. & Moens M. 2005. A molecular phylogenetic approach to Longodoridae (Nematoda: Dorylaimida). Nematology 7: 111-124.
  33. Chizhov V.N., Chumakova O.A., Subbotin S.A. & Baldwin J. G. 2006. Morphological and molecular characterization of foliar nematodes of the genus Aphelenchoides: A. fragariae and A. ritzemabosi (Nematoda: Aphelenchoididae) from the Main Botanical Garden of the Russian Academy of Sciences, Moscow. Russian Journal of Nematology. Vol. 14. p. 179-184.
  34. Phan, K.L., Spiridonov, S.E., Subbotin, S.A. & Moens, M. 2006. Four new species of Steinernema Travassos, 1928 with short infective juveniles from Vietnam. Russian Journal of Nematology, Vol. 14. p. 11-29.
  35. Subbotin S.A., Sturhan D., Chizhov V.N., Vovlas N. & Baldwin J.G. 2006. Phylogenetic analysis of Tylenchida Thome, 1949 as-inferred from D2 and D3 expansion fragments of the 28S rRNA gene sequences. Nematology 8: 455-474.
  36. Tanha Maafi Z., Sturhan D., Subbotin S.A. & Moens M. 2006. Heteroderapersica sp. n. (Tylenchida: Heteroderidae) parasitizing Persian hogweed (Heracleium persicum (Desf. ExFisch.) in Iran. Russian Journal of Nematology 14. p. 171-178.
  37. Baicheva O., Zinovieva S.V., Chizhov V.N., Karapetyan J. Root-knot nematodes ( Nematoda : Meloidogynidać) in terrain of the Russian Federation, Armenia and Bulgaria. // Experimental Pathology and Parasitology, 2007. V.9 N.3.
  38. Sturhan D., Wouts W.M. , Subbotin S.A. An unusual cyst nematode from New Zealand, Paradolichodera tenuissima gen. n., sp. n. (Tylenchida, Heteroderidae). Nematology 2007. V. 9. P. 561-571.
  39. Subbotin S.A., Sturhan D., Vovlas N., Castillo P., Tanyi Tambe J., Moens M. & Baldwin J.G. Application of secondary structure model of rRNA for phylogeny: D2-D3 expansion segments of the LSU gene of plant-parasitic nematodes from the family Hoplolaimidae Filipjev, 1934. Molecular Phylogenetics and Evolution. 2007 V. 43. P. 881-890.
  40. Tanha Maafi Z., Sturhan D., Handoo Z., Mordehai M., Moens M. , Subbotin S.A. Morphological and molecular studies of Heterodera sacchari, H. goldeni and H. leuceilyma (Nematoda: Heteroderidae) // Nematology 2007. V. 9. P. 483-497.

Best publications for 1997-2002 (English)
  1. Zinovieva S.V., Udalova Zh. V., Vasiljeva I.S., Paseschnichenko V.A. Action of sterol glycosides on Meloidogyne incognita infrcting tomato and cucumber roots. Russins J. Nematology, 1997, 5, 77-78.
  2. Kulinich O.A., Orlinskii P.D. Distribution of conifer beetles (Scolytide, Curculionidae, Cerambycidae) and wood nematodes (Bursaphelenchus spp.) in European and Asian Russia/ Bulletin OEPP/EPPO Bulletein 1998. 28. 39-52
  3. Subbotin S.A. et.al.Identification of Heterodera avenae group species by morphometries and rRNA-RFLPs// Nemtology 1999 V. 1 N2 P. 195-207
  4. Subbotin S.A., Vierstraete A., De Ley P., Rower J., Waeyenberge L., Moens M., Vanfleteren J. R. 2001. Phylogenetic relationships within the cyst-forming nematodes (Nematoda, Heteroderidae) based on analysis of sequences from the ITS regions of ribosomal DNA. Molecular Phylogenetis and Evolution Vol. 21. P. 1-16

List of text-books, chapters from text-books and teaching aids for 2002-2006 (in English)
  1. Subbotin S.A. & Moens, M. 2006. Molecular Taxonomy and Phylogeny. In Book: Plant Nematology edited by R. Perry and M. Moens. CABI, UK
  2. Subbotin S.A. 2006. [Application of PCR for Nematode Identification]. In Book: Applied Nematology edited by S.V. Zinovieva, Nauka, Russia
  3. Hooper D.J., Hallmann J. & Subbotin S.A. 2005. Methods for extraction, processing and detection of plant and soil nematodes. In: M. Luc, R.A. Sikora and J. Bridge (Eds). Plant Parasitic Nematodes in Subtropical and Tropical Agriculture. Second Edition, CABI, UK
  4. Subbotin S.A., Sturhan D. & Moens M. 2004. Molecular phylogenies of plant and entomoparasitic nematodes: congruence and incongruence with morphological and biological data. In: Cook, R., and Hunt, D.J. (Eds). Proceedings of the Fourth International Congress of Nematology, 8 - 13 June 2002, Tenerife, Spain. Nematology Monographs and Perspectives 2, 601-614
  5. Zinovyeva S.V. Comprehensive and molecular Phytopathology. Eds. Yu.T.Dyakov, V.G.Dzhavakhya, T.Korpela. Elsevier. 2007 P. 483
    Chapter 1. Parasitic nematodes as plant pathogens. P. 39-47.
    Chapter 5. Zinovyeva S.V. Plant-nematode interrelationships. P. 147-150.
    Chapter 10. Zinovyeva S.V. Modification of plant gene expression at nematode invasion. P. 290-298.
  6. Subbotin, S.A, & Moens M. Biotechnology and Plant Disease Management. Ed. Z K Punja, CABI, UK. 2007. P. 580.
  7. Section B: Molecular diagnostics of plant pathogens for disease management. Perry R. N., Molecular Diagnostics of Plant-Parasitic Nematodes. P. 195-227